Structure and function of the global ocean microbiome
| Type | : | ACL |
|---|---|---|
| Nature | : | Production scientifique |
| Au bénéfice du Laboratoire | : | Oui |
| Statut de publication | : | Publié |
| Année de publication | : | 2015 |
| Auteurs (51) | : | SUNAGAWA Shinichi COELHO Luis,pedro CHAFFRON Samuel ROAT KULTIMA Jens LABADIE Karine SALAZAR Guillem DJAHANSCHIRI Bardya ZELLER Georg MENDE Daniel,r ALBERTI Adriana CORNEJO-CASTILLO Francisco,m COSTEA Paul,i CRUAUD Corinne D'OVIDIO Francesco ENGELEN Stefan FERRERA Isabel GASOL Josep,m GUIDI Lionel HILDEBRAND Falk KOKOSZKA Florian LEPOIVRE Cyrille LIMA-MENDEZ Gipsi POULAIN Julie POULOS Bonnie,t ROYO-LLONCH Marta SARMENTO Hugo VIEIRA-SILVA Sara DIMIER Céline PICHERAL Marc SEARSON Sarah KANDELS-LEWIS Stefanie TARA OCEANS Coordinators BOWLER Chris DE VARGAS Colomban GORSKY Gabriel GRIMSLEY Nigel HINGAMP Pascal IUDICONE Daniele JAILLON Olivier NOT Fabrice OGATA Hiroyuki PESANT Stéphane SPEICH Sabrina STEMMANN Lars SULLIVAN Matthew,b WEISSENBACH Jean WINCKER Patrick KARSENTI Eric RAES Jeroen ACINAS Silvia,g BORK Peer |
| Revue scientifique | : | Science |
| Volume | : | 348 |
| Fascicule | : | 6237 |
| Pages | : | |
| DOI | : | 10.1126/science.1261359 |
| URL | : | http://www.sciencemag.org/content/348/6237/1261359.abstract |
| Abstract | : | Microbes are dominant drivers of biogeochemical processes, yet drawing a global picture of functional diversity, microbial community structure, and their ecological determinants remains a grand challenge. We analyzed 7.2 terabases of metagenomic data from 243 Tara Oceans samples from 68 locations in epipelagic and mesopelagic waters across the globe to generate an ocean microbial reference gene catalog with >40 million nonredundant, mostly novel sequences from viruses, prokaryotes, and picoeukaryotes. Using 139 prokaryote-enriched samples, containing >35,000 species, we show vertical stratification with epipelagic community composition mostly driven by temperature rather than other environmental factors or geography. We identify ocean microbial core functionality and reveal that >73% of its abundance is shared with the human gut microbiome despite the physicochemical differences between these two ecosystems. |
| Mots-clés | : | - |
| Commentaire | : | - |
| Tags | : | TARA |
| Fichier attaché | : | - |
| Citation | : |
Sunagawa S, Coelho LP, Chaffron S, Roat Kultima J, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, D'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Tara Oceans C, Bowler C, De Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P (2015) Structure and function of the global ocean microbiome. Science 348 | doi: 10.1126/science.1261359
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