Patterns and ecological drivers of ocean viral communities
| Type | : | ACL |
|---|---|---|
| Nature | : | Production scientifique |
| Au bénéfice du Laboratoire | : | Oui |
| Statut de publication | : | Publié |
| Année de publication | : | 2015 |
| Auteurs (32) | : | BRUM Jennifer,r IGNACIO-ESPINOZA J,cesar ROUX Simon DOULCIER Guilhem ACINAS Silvia,g ALBERTI Adriana CHAFFRON Samuel CRUAUD Corinne DE VARGAS Colomban GASOL Josep,m GORSKY Gabriel GREGORY Ann,c GUIDI Lionel HINGAMP Pascal IUDICONE Daniele NOT Fabrice OGATA Hiroyuki PESANT Stéphane POULOS Bonnie,t SCHWENCK Sarah,m SPEICH Sabrina DIMIER Céline KANDELS-LEWIS Stefanie PICHERAL Marc SEARSON Sarah TARA OCEANS Coordinators BORK Peer BOWLER Chris SUNAGAWA Shinichi WINCKER Patrick KARSENTI Eric SULLIVAN Matthew,b |
| Revue scientifique | : | Science |
| Volume | : | 348 |
| Fascicule | : | 6237 |
| Pages | : | |
| DOI | : | 10.1126/science.1261498 |
| URL | : | http://www.sciencemag.org/content/348/6237/1261498.abstract |
| Abstract | : | Viruses influence ecosystems by modulating microbial population size, diversity, metabolic outputs, and gene flow. Here, we use quantitative double-stranded DNA (dsDNA) viral-fraction metagenomes (viromes) and whole viral community morphological data sets from 43 Tara Oceans expedition samples to assess viral community patterns and structure in the upper ocean. Protein cluster cataloging defined pelagic upper-ocean viral community pan and core gene sets and suggested that this sequence space is well-sampled. Analyses of viral protein clusters, populations, and morphology revealed biogeographic patterns whereby viral communities were passively transported on oceanic currents and locally structured by environmental conditions that affect host community structure. Together, these investigations establish a global ocean dsDNA viromic data set with analyses supporting the seed-bank hypothesis to explain how oceanic viral communities maintain high local diversity. |
| Mots-clés | : | - |
| Commentaire | : | - |
| Tags | : | TARA |
| Fichier attaché | : | - |
| Citation | : |
Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, De Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Tara Oceans C, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB (2015) Patterns and ecological drivers of ocean viral communities. Science 348 | doi: 10.1126/science.1261498
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