DE VARGAS Colomban
| : | - | |
|---|---|---|
| Membre du laboratoire | : | Non |
| Organisme | : | - |
| Equipes | : | - |
Références (64)
ACL
Le bescot N, Mahé F, Audic S, Dimier C, Garet-Delmas M-J, Poulain P-M, Wincker P, De Vargas C, Siano R (2016) Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding. Environ Microbiol 18: 609-626 | doi: 10.1111/1462-2920.13039
ACL
Forster D, Dunthorn M, Mahé F, Dolan JR, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie J-M, Decelle J, Edvardsen B, Egge J, Eikrem W, Gobet A, Kooistra WHCF, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Richards TA, Santini S, Sarno AF, Siano R, Vaulot D, Wincker P, Zingone A, De Vargas C, Stoeck T (2016) Benthic protists: the under-charted majority. Fems Microbiol Ecol 92 | doi: 10.1093/femsec/fiw120
ACL
Guidi L, Chaffron S, Bittner L, Eveillard D, Larhlimi A, Roux S, Darzi Y, Audic S, Berline L, Brum JR, Coelho LP, Espinoza JCI, Malviya S, Sunagawa S, Dimier C, Kandels-Lewis S, Picheral M, Poulain P-M, Searson S, Tara Oceans Consortium C, Stemmann L, Not F, Hingamp P, Speich S, Follows M, Karp-Boss L, Boss E, Ogata H, Pesant S, Weissenbach J, Wincker P, Acinas SG, Bork P, De Vargas C, Iudicone D, Sullivan MB, Raes J, Karsenti E, Bowler C, Gorsky G (2016) Plankton networks driving carbon export in the oligotrophic ocean. Nature 532: 465-470 | doi: 10.1038/nature16942
ACL
Massana R, Gobet A, Audic S, Bass D, Bittner L, Boutte C, Chambouvet A, Christen R, Claverie J-M, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Forn I, Forster D, Guillou L, Jaillon O, Kooistra WHCF, Logares R, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Probert I, Romac S, Richards TA, Santini S, Salchian-Tabrizi K, Siano R, Simon N, Stoeck T, Vaulot D, Zingone A, De Vargas C (2015) Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing. Environ Microbiol | doi: 10.1111/1462-2920.12955
ACL
Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet M, Casotti R, Chase A, Dolan JR, D'Ortenzio F, Gattuso J-P, Grima N, Guidi L, Hill CN, Jahn O, Jamet J-L, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan J-B, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Coordinators T-O, Acinas SG, Bork P, Boss E, De Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D (2015) Environmental characteristics of Agulhas rings affect interocean plankton transport. Science 348 | doi: 10.1126/science.1261447
ACL
Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinoza JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, D'Ovidio F, De Meester L, Ferrera I, Garet-Delmas M-J, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sánchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Tara Oceans C, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, De Vargas C, Raes J (2015) Determinants of community structure in the global plankton interactome. Science 348 | doi: 10.1126/science.1262073
ACL
Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, De Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Tara Oceans C, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB (2015) Patterns and ecological drivers of ocean viral communities. Science 348 | doi: 10.1126/science.1261498
ACL
Sunagawa S, Coelho LP, Chaffron S, Roat Kultima J, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, D'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Tara Oceans C, Bowler C, De Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P (2015) Structure and function of the global ocean microbiome. Science 348 | doi: 10.1126/science.1261359
ACL
De Vargas C, Audic S, Henry N, Decelle J, Mahé F, Logares R, Lara E, Berney C, Le bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury J-M, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horák A, Jaillon O, Lima-Mendez G, Lukeš J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Tara Oceans C, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E (2015) Eukaryotic plankton diversity in the sunlit ocean. Science 348 | doi: 10.1126/science.1261605
ACL
Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie J-M, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WHCF, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, De Vargas C, Massana R (2014) Patterns of Rare and Abundant Marine Microbial Eukaryotes. Curr Biol 24: 813-821 | doi: 10.1016/j.cub.2014.02.050
ACL
Richier S, Bowler C, De Vargas C, Claverie J-M, Ogata H, Probert I, Von Dassow P, Brownlee C, Richards TA, Shiraiwa Y, Young J, Read BA, Kegel J, Klute MJ, Kuo A, Lefebvre SC, Maumus F, Mayer C, Miller J, Monier A, Salamov A, Aguilar M, Frickenhaus S, Gonzalez K, Herman EK, Lin Y-C, Napier J, Sarno AF, Shmutz J, Schroeder D, Verret F, Valentin K, Van de Peer Y, Wheeler G, Dacks JB, Delwiche CF, Dyhrman ST, Gloeckner G, John U, Worden AZ, Zhang X, Grigoriev IV, Allen AE, Bidle K, Borodovsky M, Cock JM, Elias M, Gladyshev VN, Groth M, Guda C, Hadaegh A, Iglesias-Rodriguez M, Jenkins J, Jones BM, Lawson T, Leese F, Lindquist E, Lobanov A, Lomsadze A, Malik S-B, Marsh ME, Mackinder L, Mock T, Mueller-Roeber B, Pagarete A, Parker M, Quesneville H, Raines C, Rensing SA, Riano-Pachon DM, Rokitta S, Soanes DM, Van der Giezen M, Wahlund TM, Williams B, Wilson W, Wolfe G, Wurch LL (2013) Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature 499: 209-213 | doi: 10.1038/nature12221
ACL
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, De Vargas C, Decelle J, Del Campo J, Dolan JR, Dunthorn M, Edvardsen B, Holzmann M, Kooistra WHCF, Lara E, Le bescot N, Logares R, Mahé F, Massana R, Montresor M, Morard R, Not F, Pawlowski L, Probert I, Sauvadet A-L, Siano R, Stoeck T, Vaulot D, Zimmermann P, Christen R (2013) The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy. Nucl Acids Res 41 | doi: 10.1093/nar/gks1160
ACL
Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie J-M, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P, Tara Oceans C (2011) A Holistic Approach to Marine Eco-Systems Biology. Plos Biol 9 | doi: 10.1371/journal.pbio.1001177
ACL
Richier S, Kerros M-E, De Vargas C, Haramaty L, Falkowski PG, Gattuso J-P (2009) Light-dependent transcriptional regulation of genes of biogeochemical interest in the diploid and haploid life cycle stages of Emiliania huxleyi. Appl Environ Microb 75: 3366-3369 | doi: 10.1128/AEM.02737-08